Acridine Orange base [494-38-2]

Acridine Orange base is a cell-permeable fluorescent dye that binds to nucleic acids and emits different colors of fluorescence, which exhibits green fluorescence when bound to dsDNA (Ex=488 nm, Em=520-524 nm) and red fluorescence when bound to ssDNA or ssRNA (Ex=457 nm, Em=630-644 nm) and can be used for cell cycle analysis and apoptosis detection.

Fixed cell staining
I. Sample preparation:
1. For cells in suspension culture or hematology samples: rinse cells once with ice-cold PBS and suspend in ice-cold PBS at 10^6 cells/mL.
2. For cells attached to tissue culture plates: collect cells from flasks or culture dishes by trypsinization, fill the trypsinized cells with cells floating in the culture medium (mainly isolated mitotic and dead cells), and then use culture medium containing serum to inactivate trypsin. Finally, suspend the cells in ice-cold PBS at about 10^6 cells/mL.
3. For cells isolated from solid tumors: rinse cells without any enzymes for cell dissociation and suspend in ice-cold PBS at about 10^6 cells/mL.
II. Operation steps:
1. Transfer 1 mL of cell suspension with a Pasteur pipette to a 15 mL conical glass tube containing 10 mL of ice-cold 70% ethanol. Fix the cells on ice for ≥2 hours.
2. Centrifuge the tube at 300 × g, 4°C for 5 min. Remove all ethanol with ice-cold PBS, rinse once, and suspend in ice-cold PBS at a density of <2×10^6 cells/mL.
3. Take 0.2 mL of cell suspension (≤2×10^5 cells) and transfer to a small tube. Cool on ice.
4. Add 0.4 mL of ice-cold permeabilization solution. Wait 15 seconds and keep cells on ice.
5. Add 1.2 mL of ice-cold AO staining solution. Keep cells on ice.
6. Add 1.2 mL of ice-cold Acridine Orange base staining solution. Keep cells on ice.
7.After adding Acridine Orange base solution, measure and record cell fluorescence using a flow cytometer within 2 to 10 minutes. [1]

The above information is based on published literature. Experimental procedures should be appropriately modified to meet specific research demands.

DMSO: 30 mg/mL (113.06 mM), Sonication is recommended.

H2O: 4 mg/mL (15.07 mM), Sonication is recommended.

1 M HCl: 180 mg/mL (678.35 mM), Sonication is recommended.